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Albert Fradera Sola
I consider myself as a multi-task and open-minded person. I enjoy having excellent relationship with my colleagues and I can easily adapt to different and new projects. I am very committed to my work and I always try to give the maximum performance in order to achieve the best results.
Education
PhD Candidate, Quantitative Proteomics
JGU University
Mainz, Germany
Current - 2018
- PhD thesis: Computational approaches to mass spectrometry based quantitative proteomics
M.Sc. in Omics Data Analysis
University of Vic
Barcelona, Spain
2017 - 2016
- Master thesis: Development of a scoring function for finding differential expression - application to Lolium Perenne
- Erasmus + grant fellow
Research Experience
PhD candidate
Butter laboratory - Institure Molecular Biology
Mainz, Germany
Current - 2018
- PhD candidate with Dr. Falk Butter (F.Butter@imb-mainz.de)
- Publications: 1 first-author paper (in submission), 5 co-author papers
Master student
Narcis Fernandez-Fuentes - IBERS
Aberystwyth, UK
2017
- MSc student with Dr. Narc
s Fernandez-Fuentes (naf4@aber.ac.uk) - Publications: 1 first-authtor paper, 1 co-author paper
Dry lab projects and related skills
“I enjoy using multiomics tools to integrate different research disciplines”
Publication abstract’s wordcloud
Network-based assignment of RNA binding proteins functionality
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- Function-based networks were created from quantitative proteomics data and made accessible through a shiny app.
- Keywords: Network | Functional analysis | KEGG | GO | R Shiny
Temporal proteome profiling of Xenopus and Leismania species
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- Proteome differential expression was investigated at different stages
- Clustering (Self Organizing Maps) and dimesionality reduction techniques (Principal Component Analysis) were applied.
- Keywords: Proteome | Differential expression | SOM | PCA | Clustering
Scoring function for RNAseq differential expression assessment
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- A scoring function was developed around three RNAseq differential expression assessment R packages (DESeq2, edgeR, limma+voom)
- Keywords: NGS | RNA-Seq | Quality control | Differential expression
ChIPseq characterization of a novel ATPase in T. brucei
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- H2A.Z deposition was investigated and visualized with genome tracks
- Keywords: NGS | ChIP-Seq | Genome tracks
Conferences and courses
Conferences
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- 2022 | Statistical data analysis for genome-scale biology |Flash talk
- 2021 | Network biology |Plenary talk
- 2019 | FEBS advanced course |Poster presentation
Courses
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- 2022 | Data visualization for scientists
- 2021 | Scientific writing
- 2020 | Convincing scientific presentations
“I nurture data visualization skills as a path towards better science communication”
Selected Publications
Genomics
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- 2022 | PLoS Pathogens | https://doi.org/10.1371/journal.ppat.1010514
- 2021 | Nature Comunications | https://doi.org/10.1038/s41467-021-22861-2
- 2021 | PLoS One | https://doi.org/10.1371/journal.pone.0249636
- 2019 | PLoS One | https://doi.org/10.1371/journal.pone.0220518
Proteomics
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- 2021 | Journal of Cell Science | https://doi.org/10.1242/jcs.254300
- 2020 | RNA | https://doi.org/10.1261/rna.076281.120
Document created with the R packages pagedown and datadrivencv.
The source code is available on github.com/AFraderaSola/CV.
Last updated on 2022-07-20.